Plot 95 Confidence Interval Python
The histogram in the above plot shows the probability density of the bootstrap replicates or the mean time to accidents when the process was repeated 10,000 times. For a 95% confidence interval, we need to find the range where 95% of times the mean of our replicates falls. Camp course “Statistical Thinking in Python”. # Show the plot plt.show 95% confidence interval of the bootstrap replicates= 68 82 games.
The confidence interval helps in determining the interval at which the population mean can be defined. Let's try to understand this concept by using an example. Let's take the height of every man in Kenya and determine with 95% confidence interval the average of height of Kenyan men at a national level. Compute the 95% confidence interval using np.percentile and passing in two arguments: The array bsreplicates, and the list of percentiles - in this case 2.5 and 97.5. Print the confidence interval. Plot a histogram of your bootstrap replicates. This has been done for you, so hit 'Submit Answer' to see the plot! Finally, we can calculate the empirical confidence intervals using the percentile NumPy function. A 95% confidence interval is used, so the values at the 2.5 and 97.5 percentiles are selected. Putting this all together, the complete example is listed below.
1. Basics of ARIMA model
As the name suggests, this model involves three parts: Autoregressive part, Integrated and Moving Average part. Let us explore these parts one by one.
A) Autoregressive part
Autoregressive part refers to relationship between the variable (that we are trying to forecast) with its own lagged values. The order of AR term is denoted by p. If p=2, that means the variable depends upon past two lagged values. In case of seasonal ARIMA model, the seasonal AR part is denoted by the notation P.
- If P is let us say, 1, then that means the time series variable depends on the value for the same period during the last season. For example, if it is monthly data, then the value observed during March this year is dependent on value observed during last year March.
- While the non-seasonal AR order 2 indicates the value observed during March this year is dependent on value observed during February and January of this year.
- What will be the meaning of AR seasonal order P = 3 in case of monthly data? That means, if the present month is March, 2018 then time series value for this month is dependent on values during March 2017, March 2016 and March 2015.
B) Integrated part
Integrated part refers to order of differencing. Non-seasonal differencing order is denoted by d and seasonal differencing order by D. Integrated part is essential when the series is non-stationary.
C) Moving Average part
In ARIMA model, Moving Average order indicates the dependence of present value of the time series variable on the lagged error terms. The non-seasonal MA order is denoted by q while the seasonal MA order is denoted by Q.
The order of MA part can be inferred from the Auto-Correlation Function (ACF) plot.
The following picture depicts a SARIMA model of the order (p,d,q)(P,D,Q)m (Fore more on this).
SARIMA (p,d,q)(P,D,Q)m |
2. Example in Python
Using the famous Airline Passengers dataset, let us build the ARIMA model.
a) Auto-Correlation Function (ACF) plot
ACF plot with 99% Confidence Intervals |
ACF plot with 95% Confidence Intervals |
As you can see from these ACF plots, width of the confidence interval band decreases with increase in alpha value. These ACF plots and also the earlier line graph reveal that time series requires differencing (Further use ADF or KPSS tests)
If you want to get ACF values, then use the following code.
ACF values |
b) Partial Auto-Correlation Function (PACF) plot
Now let us plot PACF.
c) Seasonal differencing
Plot 95 Confidence Interval Python Recursive
d) Fitting the model
i) ARIMAii) SARIMA
e) Diagnostic Plots
We want the residuals to be white noise process.
f) Forecasting
In case of ARIMA model, we can use the following code:
Plot 95 Confidence Interval Python Function
a) Forecast and confidence intervals
Or alternatively, we can get the prediction and confidence intervals for the predictions as shown below.
b) Plot the forecasted values and confidence intervals
For this, I have used the code from this blog-post, and modified it accordingly.
Further, we can use dynamic forecasting which uses the forecasted time series variable value instead of true time series value for prediction. But generally it does not perform as good as the normal static method.
Points to consider:
- Generally total order of differencing (d+D) should be not more than two.
- Even though we derive p and P values from PACF plots and q and Q values from ACF plots, we have to overfit, check residues, check performance. Model building is an art which requires us to consider various points before shortlisting the models.
- AIC should be used to compare the models with the same order of differencing (link).
Summary
- the basics of ARIMA/SARIMA models and
- how to forecast using these models in Python
We often need to estimate parameters from nonlinear regression of data. We should also consider how good the parameters are, and one way to do that is to consider the confidence interval. A confidence interval tells us a range that we are confident the true parameter lies in.
In this example we use a nonlinear curve-fitting function: scipy.optimize.curve_fit to give us the parameters in a function that we define which best fit the data. The scipy.optimize.curve_fit function also gives us the covariance matrix which we can use to estimate the standard error of each parameter. Finally, we modify the standard error by a student-t value which accounts for the additional uncertainty in our estimates due to the small number of data points we are fitting to.
We will fit the function (y = a x / (b + x)) to some data, and compute the 95% confidence intervals on the parameters.
You can see by inspection that the fit looks pretty reasonable. The parameter confidence intervals are not too big, so we can be pretty confident of their values.
Copyright (C) 2013 by John Kitchin. See the License for information about copying.